I agree that if the jQuery is part of the module itself (I missed that part), you should inject the scripts from the module.
That's easy to do with asp.net, check the code in the skin object I mentioned if you don't know how to.

To answer your question:
There  is no central place to force injection without hacking the core.
(read inject the code in default.aspx)

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And for the use-cases where you DO need to load it in the skin itself - here's a blog by Vitaly Kozadayev about how to load it in the skin file: http://www.dotnetnuke.com/Resources/B...

 <script runat="server"> 

Private Sub Page_Load(ByVal sender As System.Object, ByVal e As System.EventArgs) Handles MyBase.Load 
          DotNetNuke.Framework.jQuery.RequestRegistration() 

End Sub 

</script>

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Andrew Walker

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