Coz, email me if you can. I would be interested in taking a look at your database if you could give me access. I am curious to see what is causing this, I imagine it is something in the Roles table.

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Chris Hammond
Former DNN Corp Employee, MVP, Core Team Member, Trustee
Christoc.com Software Solutions DotNetNuke Module Development, Upgrades and consulting.
dnnCHAT.com a chat room for DotNetNuke discussions

My guess is that the portals with this issue were created with a Template, can anyone else confirm this when they have the problem?

Here is some SQL that you can run in the HOST/SQL Window to fix this on portals 
(as with all SQL please backup your website/database prior to running this, just in case something breaks!, use at your own risk, etc)

update {databaseOwner}{objectQualifier}portals
set
AdministratorRoleId = (select roleid 
	from {databaseOwner}{objectQualifier}Roles 
	where {databaseOwner}{objectQualifier}Roles.PortalID
		={databaseOwner}{objectQualifier}Portals.PortalID 
	and RoleName = 'Administrators')

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Chris Hammond
Former DNN Corp Employee, MVP, Core Team Member, Trustee
Christoc.com Software Solutions DotNetNuke Module Development, Upgrades and consulting.
dnnCHAT.com a chat room for DotNetNuke discussions

Weggetor, what version of DNN are you running?

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Chris Hammond
Former DNN Corp Employee, MVP, Core Team Member, Trustee
Christoc.com Software Solutions DotNetNuke Module Development, Upgrades and consulting.
dnnCHAT.com a chat room for DotNetNuke discussions